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1

Molecular and Supramolecular Architecture of theSalmo gairdneriProteinaceous Eggshell during Development

Paraskevi Papadopoulou, Vassilis K. Galanopoulos, Stavros J. Hamodrakas

Journal:

Journal of Structural Biology

Year:

1996

Language:

english

File:

PDF, 14.67 MB

english, 1996

2

αCGRP, another amyloidogenic member of the CGRP family

Tsiolaki, Paraskevi L., Nasi, Georgia I., Baltoumas, Fotis A., Louros, Nikolaos N., Magafa, Vassiliki, Hamodrakas, Stavros J., Iconomidou, Vassiliki A.

Journal:

Journal of Structural Biology

Year:

2018

Language:

english

File:

PDF, 1.46 MB

english, 2018

3

FT-Raman spectroscopy as diagnostic tool of Congo red binding to amyloids

Vassiliki A. Iconomidou, Georgios D. Chryssikos, Vassilis Gionis, Andreas Hoenger, Stavros J. Hamodrakas

Journal:

Year:

2003

Language:

english

File:

PDF, 172 KB

english, 2003

4

The silkmoth eggshell as a natural amyloid shield for the safe development of insect oocyte and embryo: Insights from studies of silkmoth chorion protein peptide-analogues of the B famil

Vassiliki A. Iconomidou, Paul Cordopatis, Andreas Hoenger, Stavros J. Hamodrakas

Journal:

Year:

2011

Language:

english

File:

PDF, 2.67 MB

english, 2011

5

An amyloidogenic determinant in n-terminal pro-brain natriuretic peptide (nt-probnp): Implications for cardiac amyloidoses

Vassiliki A. Iconomidou, Danae Pheida, Eftihia S. Hamodraka, Claude Antony, Andreas Hoenger, Stavros J. Hamodrakas

Journal:

Year:

2012

Language:

english

File:

PDF, 974 KB

english, 2012

6

Molecular, crystal and solution structure of a β-cyclodextrin complex with the bromide salt of 2-(3-dimethylaminopropyl)tricyclo[3.3.1.13,7]decan-2-ol, a potent antimicrobial drug

Anastassis Perrakis, Ekaterini Antoniadou-Vyza, Polyxeni Tsitsa, Victor S. Lamzin, Keith S. Wilson, Stavros J. Hamodrakas

Journal:

Carbohydrate Research

Year:

1999

Language:

english

File:

PDF, 461 KB

english, 1999

7

Amyloidogenic determinants are usually not buried

Kimon K Frousios, Vassiliki A Iconomidou, Carolina-Maria Karletidi, Stavros J Hamodrakas

Journal:

BMC Structural Biology

Year:

2009

Language:

english

File:

PDF, 1.02 MB

english, 2009

8

PRED-CLASS: Cascading neural networks for generalized protein classification and genome-wide applications

Claude Pasquier, Vassilis J. Promponas, Stavros J. Hamodrakas

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2001

Language:

english

File:

PDF, 126 KB

english, 2001

9

Conformational analysis of peptide analogues of silkmoth chorion protein segments using CD, NMR and molecular modelling

Dimitra C. Benaki, Dr Emmanuel Mikros, Stavros J. Hamodrakas

Journal:

Journal of Peptide Science

Year:

2004

Language:

english

File:

PDF, 289 KB

english, 2004

10

Cytokine gene polymorphisms in periodontal disease: a meta-analysis of 53 studies including 4178 cases and 4590 controls

Georgios K. Nikolopoulos, Niki L. Dimou, Stavros J. Hamodrakas, Pantelis G. Bagos

Journal:

Journal of Clinical Periodontology

Year:

2008

Language:

english

File:

PDF, 280 KB

english, 2008

11

Fcγ receptor polymorphisms and their association with periodontal disease: a meta-analysis

Niki L. Dimou, Georgios K. Nikolopoulos, Stavros J. Hamodrakas, Pantelis G. Bagos

Journal:

Journal of Clinical Periodontology

Year:

2010

Language:

english

File:

PDF, 309 KB

english, 2010

12

Protein aggregation and amyloid fibril formation prediction software from primary sequence: towards controlling the formation of bacterial inclusion bodies

Stavros J. Hamodrakas

Journal:

Year:

2011

Language:

english

File:

PDF, 334 KB

english, 2011

13

Laser-Raman and infrared spectroscopic studies of protein conformation in the eggshell of the fish Salmo gairdneri

Stavros J. Hamodrakas, Efstratios I. Kamitsos, Paraskevi G. Papadopoulou

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1987

Language:

english

File:

PDF, 544 KB

english, 1987

14

Secondary structure of synthetic peptides derived from the repeating unit of a giant secretory protein from Chironomus tentans

Susan E. Wellman, Stavros J. Hamodrakas, Efstratios I. Kamitsos, Steven T. Case

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1992

Language:

english

File:

PDF, 553 KB

english, 1992

15

A possible structural model of members of the CPF family of cuticular proteins implicating binding to components other than chitin

Nikos C. Papandreou, Vassiliki A. Iconomidou, Judith H. Willis, Stavros J. Hamodrakas

Journal:

Journal of Insect Physiology

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

16

GeneViTo: Visualizing gene-product functional and structural features in genomic datasets

Georgios S Vernikos, Christos G Gkogkas, Vasilis J Promponas, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2003

Language:

english

File:

PDF, 1.21 MB

english, 2003

17

cuticleDB: a relational database of Arthropod cuticular proteins

Christiana K Magkrioti, Ioannis C Spyropoulos, Vassiliki A Iconomidou, Judith H Willis, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 400 KB

english, 2004

18

A Hidden Markov Model method, capable of predicting and discriminating β-barrel outer membrane proteins

Pantelis G Bagos, Theodore D Liakopoulos, Ioannis C Spyropoulos, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 716 KB

english, 2004

19

A database for G proteins and their interaction with GPCRs

Antigoni L Elefsinioti, Pantelis G Bagos, Ioannis C Spyropoulos, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 1.22 MB

english, 2004

20

A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models

Nikolaos G Sgourakis, Pantelis G Bagos, Panagiotis K Papasaikas, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 491 KB

english, 2005

21

Evaluation of methods for predicting the topology of β-barrel outer membrane proteins and a consensus prediction method

Pantelis G Bagos, Theodore D Liakopoulos, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 376 KB

english, 2005

22

N-terminal sequence-based prediction of subcellular location

Evangelia I Petsalakis, Pantelis G Bagos, Zoi I Litou, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 131 KB

english, 2005

23

Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins

Pantelis G Bagos, Theodore D Liakopoulos, Stavros J Hamodrakas

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 818 KB

english, 2006

24

Unique features of the structural model of ‘hard’ cuticle proteins: implications for chitin–protein interactions and cross-linking in cuticle

Vassiliki A. Iconomidou, Judith H. Willis, Stavros J. Hamodrakas

Journal:

Insect Biochemistry and Molecular Biology

Year:

2005

Language:

english

File:

PDF, 342 KB

english, 2005

25

The Crystal Structure of the Complexes of Concanavalin A with 4′-Nitrophenyl-α-d-mannopyranoside and 4′-Nitrophenyl-α-d-glucopyranoside

Panagiotis N. Kanellopoulos, Kyriaki Pavlou, Anastassis Perrakis, Bogos Agianian, Constantin E. Vorgias, Costas Mavrommatis, Maria Soufi, Paul A. Tucker, Stavros J. Hamodrakas

Journal:

Journal of Structural Biology

Year:

1996

Language:

english

File:

PDF, 2.32 MB

english, 1996

26

The Crystal Structure of the Complex of Concanavalin A with 4′-Methylumbelliferyl-α-d-glucopyranoside

Stavros J. Hamodrakas, Panagiotis N. Kanellopoulos, Kyriaki Pavlou, Paul A. Tucker

Journal:

Journal of Structural Biology

Year:

1997

Language:

english

File:

PDF, 566 KB

english, 1997

27

A Triclinic Crystal Form of the Lectin Concanavalin A

Panagiotis N. Kanellopoulos, Paul A. Tucker, Kyriaki Pavlou, Bogos Agianian, Stavros J. Hamodrakas

Journal:

Journal of Structural Biology

Year:

1996

Language:

english

File:

PDF, 428 KB

english, 1996

28

Drosophila cuticular proteins with the R&R Consensus: Annotation and classification with a new tool for discriminating RR-1 and RR-2 sequences

Maria V. Karouzou, Yannis Spyropoulos, Vassiliki A. Iconomidou, R.S. Cornman, Stavros J. Hamodrakas, Judith H. Willis

Journal:

Insect Biochemistry and Molecular Biology

Year:

2007

Language:

english

File:

PDF, 191 KB

english, 2007

29

Erratum to “Drosophila cuticular proteins with the R&R consensus: Annotation and classification with a new tool for discriminating RR-1 and RR-2 sequences” [Insect Biochem. Mol. Biol. 37 (2007) 754–760]

Maria V. Karouzou, Yannis Spyropoulos, Vassiliki A. Iconomidou, R.S. Cornman, Stavros J. Hamodrakas, Judith H. Willis

Journal:

Insect Biochemistry and Molecular Biology

Year:

2008

Language:

english

File:

PDF, 87 KB

english, 2008

30

Consensus prediction of amyloidogenic determinants in amyloid fibril-forming proteins

Stavros J. Hamodrakas, Christina Liappa, Vassiliki A. Iconomidou

Journal:

International Journal of Biological Macromolecules

Year:

2007

Language:

english

File:

PDF, 107 KB

english, 2007

31

Dogfish egg case structural studies by ATR FT-IR and FT-Raman spectroscopy

Vassiliki A. Iconomidou, Martha E. Georgaka, Georgios D. Chryssikos, Vassilis Gionis, Persefoni Megalofonou, Stavros J. Hamodrakas

Journal:

International Journal of Biological Macromolecules

Year:

2007

Language:

english

File:

PDF, 348 KB

english, 2007

32

Haloadaptation: Insights from comparative modeling studies of halophilic archaeal DHFRs

Panagiotis L. Kastritis, Nikos C. Papandreou, Stavros J. Hamodrakas

Journal:

International Journal of Biological Macromolecules

Year:

2007

Language:

english

File:

PDF, 577 KB

english, 2007

33

Amyloid fibril formation propensity is inherent into the hexapeptide tandemly repeating sequence of the central domain of silkmoth chorion proteins of the A-family

Vassiliki A. Iconomidou, Georgios D. Chryssikos, Vassilis Gionis, Athanassios S. Galanis, Paul Cordopatis, Andreas Hoenger, Stavros J. Hamodrakas

Journal:

Journal of Structural Biology

Year:

2006

Language:

english

File:

PDF, 1.39 MB

english, 2006

34

Prothymosin α immunoactive carboxyl-terminal peptide TKKQKTDEDD stimulates lymphocyte reactions, induces dendritic cell maturation and adopts a β-sheet conformation in a sequence-specific manner

Margarita Skopeliti, Vassiliki A. Iconomidou, Evelyna Derhovanessian, Graham Pawelec, Wolfgang Voelter, Hubert Kalbacher, Stavros J. Hamodrakas, Ourania E. Tsitsilonis

Journal:

Molecular Immunology

Year:

2009

Language:

english

File:

PDF, 1006 KB

english, 2009

35

Amyloids protect the silkmoth oocyte and embryo

Vassiliki A. Iconomidou, Gert Vriend, Stavros J. Hamodrakas

Journal:

Year:

2000

Language:

english

File:

PDF, 405 KB

english, 2000

36

Amyloid-like fibrils from an 18-residue peptide analogue of a part of the central domain of the B-family of silkmoth chorion proteins

Vassiliki A. Iconomidou, Georgios D. Chryssikos, Vassilis Gionis, Gert Vriend, Andreas Hoenger, Stavros J. Hamodrakas

Journal:

Year:

2001

Language:

english

File:

PDF, 1005 KB

english, 2001

37

Laser-Raman and FT-IR spectroscopic studies of peptide-analogues of silkmoth chorion protein segments

Dimitra C Benaki, Amalia Aggeli, Georgios D Chryssikos, Yiagos D Yiannopoulos, Efstratios I Kamitsos, Elizabeth Brumley, Steven T Case, Neville Boden, Stavros J Hamodrakas

Journal:

International Journal of Biological Macromolecules

Year:

1998

Language:

english

File:

PDF, 219 KB

english, 1998

38

“Soft”-cuticle protein secondary structure as revealed by FT-Raman, ATR FT-IR and CD spectroscopy

Vassiliki A Iconomidou, Georgios D Chryssikos, Vassilis Gionis, Judith H Willis, Stavros J Hamodrakas

Journal:

Insect Biochemistry and Molecular Biology

Year:

2001

Language:

english

File:

PDF, 157 KB

english, 2001

39

A structural model of the chitin-binding domain of cuticle proteins

Stavros J. Hamodrakas, Judith H. Willis, Vassiliki A. Iconomidou

Journal:

Insect Biochemistry and Molecular Biology

Year:

2002

Language:

english

File:

PDF, 305 KB

english, 2002

40

Is β-pleated sheet the molecular conformation which dictates formation of helicoidal cuticle?

Vassiliki A Iconomidou, Judith H Willis, Stavros J Hamodrakas

Journal:

Insect Biochemistry and Molecular Biology

Year:

1999

Language:

english

File:

PDF, 299 KB

english, 1999

41

PredSL: A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization

Evangelia I. Petsalaki, Pantelis G. Bagos, Zoi I. Litou, Stavros J. Hamodrakas

Journal:

Genomics, Proteomics & Bioinformatics

Year:

2006

Language:

english

File:

PDF, 683 KB

english, 2006

42

How Many 3D Structures Do We Need to Train a Predictor?

Pantelis G. Bagos, Georgios N. Tsaousis, Stavros J. Hamodrakas

Journal:

Genomics, Proteomics & Bioinformatics

Year:

2009

Language:

english

File:

PDF, 198 KB

english, 2009

43

LepChorionDB, a database of Lepidopteran chorion proteins and a set of tools useful for the identification of chorion proteins in Lepidopteran proteomes

Giannopoulos, Nikolaos G., Michalopoulos, Ioannis, Papandreou, Nikos C., Malatras, Apostolos, Iconomidou, Vassiliki A., Hamodrakas, Stavros J.

Journal:

Insect Biochemistry and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.54 MB

english, 2013

44

The effect of acute administration of statins on coronary microcirculation during the pre-revascularization period in patients with myocardial infraction

Ioannis A. Paraskevaidis, Efstathios K. Iliodromitis, Ignatios Ikonomidis, Loukianos Rallidis, Eftihia Hamodraka, John Parissis, Aias Andoniadis, Stavros Tzortzis, Maria Anastasiou-Nana

Journal:

Atherosclerosis

Year:

2012

Language:

english

File:

PDF, 150 KB

english, 2012

45

Amino acid periodicities and their structural implications for the evolutionarily conservative central domain of some silkmoth chorion proteins

Stavros J. Hamodrakas, Thanos Etmektzoglou, Fotis C. Kafatos

Journal:

Journal of Molecular Biology

Year:

1985

Language:

english

File:

PDF, 805 KB

english, 1985

46

Structural and functional features of Drosophila chorion proteins s36 and s38 from analysis of primary structure and infrared spectroscopy

Stavros J. Hamodrakas, Anthimia Batrinou, Tania Christophoratou

Journal:

International Journal of Biological Macromolecules

Year:

1989

Language:

english

File:

PDF, 556 KB

english, 1989

47

Tandemly repeating peptide motifs and their secondary structure in Ceratitis capitata eggshell proteins Ccs36 and Ccs38

Amalia Aggeli, Stavros J. Hamodrakas, Katia Komitopoulou, Mary Konsolaki

Journal:

International Journal of Biological Macromolecules

Year:

1991

Language:

english

File:

PDF, 740 KB

english, 1991

48

Three-dimensional reconstruction of innermost chorion layer of Drosophila grimshawi and Drosophila melanogaster eggshell mutant fs (1) 384

Lukas H. Margaritis, Stavros J. Hamodrakas, Issidora Papassideri, Talmon Arad, Kevin R. Leonard

Journal:

International Journal of Biological Macromolecules

Year:

1991

Language:

english

File:

PDF, 1.12 MB

english, 1991

49

Interactions of the α-subunits of heterotrimeric G-proteins with GPCRs, effectors and RGS proteins: A critical review and analysis of interacting surfaces, conformational shifts, structural diversity and electrostatic potentials

Baltoumas, Fotis A., Theodoropoulou, Margarita C., Hamodrakas, Stavros J.

Journal:

Journal of Structural Biology

Year:

2013

Language:

english

File:

PDF, 1.34 MB

english, 2013

50

Analysis of Molecular Recognition Features (MoRFs) in membrane proteins

Kotta-Loizou, Ioly, Tsaousis, Georgios N., Hamodrakas, Stavros J.

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2013

Language:

english

File:

PDF, 887 KB

english, 2013

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